Chipbase 3
WebSep 2, 2016 · Read more about ChIPBase; SNMNMF Submitted by ChenLiang on Fri, 09/02/2016 - 21:59. It is well known that microRNAs (miRNAs) and genes work cooperatively to form the key part of gene regulatory networks. However, the specific functional roles of most miRNAs and their combinatorial effects in cellular processes are … WebName Description type Link References ChIPBase ChIPBase a database for Transcription factor-binding sites, motifs (~1290 transcription factors) and decoding the transcriptional regulation of LncRNAs, miRNAs and protein-coding genes from ~10,200 curated peak …
Chipbase 3
Did you know?
WebAll the binding motifs data are identified by ChIPBase. 6) Select p-value: Pull down the "Adjusted p-value" menu to filter the analysis results. 7) Select GO domain: Pull down the "GO domain" menu to assign examined GO terms to the analysis. 8) Browse results: Click "Submit" to perform the GO analysis based on the selected conditions. WebNational Center for Biotechnology Information
WebThe 3'-UTR also may have silencer regions that bind repressor proteins that inhibit the expression of a mRNA. The 3'-UTR often contains miRNA response elements (MREs). MREs are sequences to which miRNAs bind. ... ChIPBase An open database for decoding the transcriptional regulatory networks of non-coding RNAs and protein-coding genes … WebMaterial of Part is PDMS. 12:40 2/23/16 3 First Year Engineering Units: Dwg. Title: Drawn By: Inst.: Dwg. No.: Hour: Date: Chip Bottom Scale: Jack Canaday and Shane ...
WebMar 29, 2024 · I am best known for my research on decoding the regulatory mechanisms mediated by transcriptional regulators and epitranscriptomic codes and developing integrative analysis platforms (ChIPBase and ... WebFor example, ChIPBase can be used to identify that the liver-specific miR-122 is regulated by three liver-enriched TFs , and that the linc2048 lncRNA is regulated by embryonic stem cell (ESC)-associated transcription factors . In addition, the integration of a large quantity of ChIP-Seq data from diverse tissues and cell lines allows us to ...
WebChIPBase has identified ∼151 187 000 regulatory relationships between ∼171 600 genes and ∼3000 regulators by analyzing ∼55 000 ChIP-seq datasets, which represent a 30-fold expansion ... how to stop infinity scroll in excelWebApr 12, 2024 · 为你推荐; 近期热门; 最新消息; 心理测试; 十二生肖; 看相大全; 姓名测试; 免费算命; 风水知识 read aloud the emuWebChIPBase browser is a powerfull genome browser which is built on JBrowse and helps users easily visualize reference sequences, gene annotations, various ChIP-seq data, etc. 1) Search term: Users can input an interested genomic region or gene name in the " … how to stop infinite while loop in pythonWebLianghu Qu's 23 research works with 1,855 citations and 6,885 reads, including: ChIPBase v3.0: the encyclopedia of transcriptional regulations of non-coding RNAs and protein-coding genes read aloud the camping tripWebNov 18, 2024 · Introduction and use of the 'LncRNA' page from ChIPBase v3.0. The submission page for lncRNA genes bound by DNA-binding proteins or histone modifications is shown with its two informational ... how to stop infected hairsWebJan 4, 2024 · ChIPBase v2.0 has been expanded with ∼10 200 curated ChIP-seq datasets, which represent about 20 times expansion when comparing to the previous released version. We identified thousands of binding motif matrices and their binding sites from … read aloud the book with no picturesWebNews: ChIPBase v2.0 has been updated to v3.0 ! Jumping to ChIPBase v3.0 page to see more function and modules. How to cite: ChIPBase v2.0: decoding transcriptional regulatory networks of non-coding RNAs and protein-coding genes from ChIP-seq data. Zhou KR, … read aloud the couch potato